Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vmn1r228Q8R2A7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Cap2-205ENSMUST00000225824 1634 ntBASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vmn1r228Q8R2A7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vmn1r228Q8R2A7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vmn1r228Q8R2A7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r228Q8R2A7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r228Q8R2A7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r228Q8R2A7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Vmn1r228Q8R2A7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r228Q8R2A7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r228Q8R2A7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vmn1r228Q8R2A7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vmn1r228Q8R2A7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Gm7417-201ENSMUST00000192950 473 ntBASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vmn1r228Q8R2A7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms