Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lin28aQ8K3Y3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Lin28aQ8K3Y3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Gm22325-201ENSMUST00000158904 308 ntBASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lin28aQ8K3Y3 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lin28aQ8K3Y3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Lin28aQ8K3Y3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Lin28aQ8K3Y3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lin28aQ8K3Y3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lin28aQ8K3Y3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lin28aQ8K3Y3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lin28aQ8K3Y3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lin28aQ8K3Y3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lin28aQ8K3Y3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Gm11927-201ENSMUST00000118472 759 ntBASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Mtag2-201ENSMUST00000058665 714 ntBASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lin28aQ8K3Y3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lin28aQ8K3Y3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Gm5643-201ENSMUST00000117081 966 ntBASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lin28aQ8K3Y3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms