Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp27Q8K194 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp27Q8K194 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp27Q8K194 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp27Q8K194 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp27Q8K194 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.04■□□□□ 0.48
Snrnp27Q8K194 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp27Q8K194 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp27Q8K194 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Snrnp27Q8K194 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Gm10812-201ENSMUST00000099864 546 ntBASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp27Q8K194 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp27Q8K194 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp27Q8K194 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.02■□□□□ 0.48
Snrnp27Q8K194 Gm5408-201ENSMUST00000197998 747 ntBASIC18.02■□□□□ 0.48
Snrnp27Q8K194 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.02■□□□□ 0.48
Snrnp27Q8K194 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Snrnp27Q8K194 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Snrnp27Q8K194 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Snrnp27Q8K194 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Snrnp27Q8K194 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp27Q8K194 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp27Q8K194 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp27Q8K194 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp27Q8K194 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18■□□□□ 0.47
Snrnp27Q8K194 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp27Q8K194 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18■□□□□ 0.47
Snrnp27Q8K194 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp27Q8K194 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18■□□□□ 0.47
Snrnp27Q8K194 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp27Q8K194 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp27Q8K194 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.98■□□□□ 0.47
Snrnp27Q8K194 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Gm37856-201ENSMUST00000191634 999 ntBASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Gm6365-201ENSMUST00000054711 744 ntBASIC17.98■□□□□ 0.47
Snrnp27Q8K194 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp27Q8K194 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp27Q8K194 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms