Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcs1Q8JZK9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcs1Q8JZK9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcs1Q8JZK9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgcs1Q8JZK9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgcs1Q8JZK9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hmgcs1Q8JZK9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hmgcs1Q8JZK9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgcs1Q8JZK9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgcs1Q8JZK9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgcs1Q8JZK9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hmgcs1Q8JZK9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hmgcs1Q8JZK9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Nespas-201ENSMUST00000143738 1083 ntBASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hmgcs1Q8JZK9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hmgcs1Q8JZK9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms