Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Depdc1aQ8CIG0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Gm42545-201ENSMUST00000202755 922 ntBASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Depdc1aQ8CIG0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Gm715-201ENSMUST00000117865 831 ntBASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Mir6349-201ENSMUST00000184059 97 ntBASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Gm43183-201ENSMUST00000200632 547 ntBASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Depdc1aQ8CIG0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 Mir2861-201ENSMUST00000175539 82 ntBASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.52■□□□□ 0.88
Depdc1aQ8CIG0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.52■□□□□ 0.87
Depdc1aQ8CIG0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Depdc1aQ8CIG0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Mir6982-201ENSMUST00000184354 68 ntBASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Gm37292-201ENSMUST00000192062 758 ntBASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Depdc1aQ8CIG0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Depdc1aQ8CIG0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms