Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.28■□□□□ 0.52
Clip4Q8CI96 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.28■□□□□ 0.52
Clip4Q8CI96 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Nespas-201ENSMUST00000143738 1083 ntBASIC18.27■□□□□ 0.52
Clip4Q8CI96 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Gm10602-201ENSMUST00000098239 609 ntBASIC18.27■□□□□ 0.52
Clip4Q8CI96 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clip4Q8CI96 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Clip4Q8CI96 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Clip4Q8CI96 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clip4Q8CI96 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clip4Q8CI96 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
Clip4Q8CI96 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.26■□□□□ 0.51
Clip4Q8CI96 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clip4Q8CI96 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clip4Q8CI96 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clip4Q8CI96 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clip4Q8CI96 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Gm6365-201ENSMUST00000054711 744 ntBASIC18.23■□□□□ 0.51
Clip4Q8CI96 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Clip4Q8CI96 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Mir5133-201ENSMUST00000174955 77 ntBASIC18.22■□□□□ 0.51
Clip4Q8CI96 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clip4Q8CI96 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clip4Q8CI96 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms