Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.73■□□□□ 0.43
Rab43Q8CG50 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Gm9987-201ENSMUST00000069768 567 ntBASIC17.73■□□□□ 0.43
Rab43Q8CG50 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.73■□□□□ 0.43
Rab43Q8CG50 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rab43Q8CG50 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.72■□□□□ 0.43
Rab43Q8CG50 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.72■□□□□ 0.43
Rab43Q8CG50 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rab43Q8CG50 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Gm42545-201ENSMUST00000202755 922 ntBASIC17.71■□□□□ 0.43
Rab43Q8CG50 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rab43Q8CG50 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab43Q8CG50 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Gm6433-201ENSMUST00000118634 875 ntBASIC17.69■□□□□ 0.42
Rab43Q8CG50 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Mir6349-201ENSMUST00000184059 97 ntBASIC17.69■□□□□ 0.42
Rab43Q8CG50 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.69■□□□□ 0.42
Rab43Q8CG50 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rab43Q8CG50 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Gm12382-201ENSMUST00000122005 922 ntBASIC17.68■□□□□ 0.42
Rab43Q8CG50 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Gm43799-201ENSMUST00000201845 579 ntBASIC17.68■□□□□ 0.42
Rab43Q8CG50 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.68■□□□□ 0.42
Rab43Q8CG50 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rab43Q8CG50 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab43Q8CG50 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms