Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smc4Q8CG47 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.43■■□□□ 1.18
Smc4Q8CG47 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smc4Q8CG47 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Smc4Q8CG47 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Smc4Q8CG47 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Smc4Q8CG47 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smc4Q8CG47 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.43■■□□□ 1.18
Smc4Q8CG47 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC22.43■■□□□ 1.18
Smc4Q8CG47 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.42■■□□□ 1.18
Smc4Q8CG47 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.42■■□□□ 1.18
Smc4Q8CG47 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Smc4Q8CG47 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Smc4Q8CG47 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Smc4Q8CG47 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Smc4Q8CG47 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Smc4Q8CG47 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Smc4Q8CG47 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Smc4Q8CG47 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Smc4Q8CG47 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Smc4Q8CG47 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.39■■□□□ 1.18
Smc4Q8CG47 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc4Q8CG47 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Smc4Q8CG47 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Smc4Q8CG47 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc4Q8CG47 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
Smc4Q8CG47 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc4Q8CG47 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Smc4Q8CG47 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Smc4Q8CG47 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Smc4Q8CG47 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.38■■□□□ 1.17
Smc4Q8CG47 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.38■■□□□ 1.17
Smc4Q8CG47 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.38■■□□□ 1.17
Smc4Q8CG47 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Smc4Q8CG47 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.37■■□□□ 1.17
Smc4Q8CG47 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Smc4Q8CG47 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Gm15375-201ENSMUST00000119510 849 ntBASIC22.37■■□□□ 1.17
Smc4Q8CG47 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Smc4Q8CG47 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.36■■□□□ 1.17
Smc4Q8CG47 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Smc4Q8CG47 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms