Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf31Q8CCF0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Prpf31Q8CCF0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.89■□□□□ 0.77
Prpf31Q8CCF0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Mtag2-201ENSMUST00000058665 714 ntBASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf31Q8CCF0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf31Q8CCF0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf31Q8CCF0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf31Q8CCF0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Gm10698-201ENSMUST00000182663 604 ntBASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prpf31Q8CCF0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Gm38285-201ENSMUST00000192928 922 ntBASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.83■□□□□ 0.77
Prpf31Q8CCF0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms