Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.17■□□□□ 0.98
Vps53Q8CCB4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps53Q8CCB4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps53Q8CCB4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vps53Q8CCB4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps53Q8CCB4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps53Q8CCB4 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.14■□□□□ 0.98
Vps53Q8CCB4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps53Q8CCB4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Vps53Q8CCB4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps53Q8CCB4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps53Q8CCB4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Vps53Q8CCB4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps53Q8CCB4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps53Q8CCB4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps53Q8CCB4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps53Q8CCB4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps53Q8CCB4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps53Q8CCB4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps53Q8CCB4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps53Q8CCB4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Trmt13-210ENSMUST00000198454 880 ntBASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps53Q8CCB4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.11■□□□□ 0.97
Vps53Q8CCB4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.11■□□□□ 0.97
Vps53Q8CCB4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps53Q8CCB4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps53Q8CCB4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps53Q8CCB4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms