Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.26■□□□□ 0.99
Shisa4Q8CA71 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shisa4Q8CA71 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shisa4Q8CA71 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Shisa4Q8CA71 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Flg-201ENSMUST00000050758 1488 ntBASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shisa4Q8CA71 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shisa4Q8CA71 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Shisa4Q8CA71 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Shisa4Q8CA71 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.2■□□□□ 0.98
Shisa4Q8CA71 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shisa4Q8CA71 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shisa4Q8CA71 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms