Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.02■□□□□ 0.48
Aph1bQ8C7N7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Aph1bQ8C7N7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Aph1bQ8C7N7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
Aph1bQ8C7N7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Aph1bQ8C7N7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Aph1bQ8C7N7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Aph1bQ8C7N7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18■□□□□ 0.47
Aph1bQ8C7N7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.99■□□□□ 0.47
Aph1bQ8C7N7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Gm22325-201ENSMUST00000158904 308 ntBASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Aph1bQ8C7N7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Gm42778-201ENSMUST00000199644 553 ntBASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Aph1bQ8C7N7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aph1bQ8C7N7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Aph1bQ8C7N7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Aph1bQ8C7N7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms