Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp20Q8C6M1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp20Q8C6M1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp20Q8C6M1 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.08■□□□□ 0.81
Usp20Q8C6M1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.08■□□□□ 0.81
Usp20Q8C6M1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp20Q8C6M1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Gm13836-201ENSMUST00000121159 501 ntBASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Gm7977-201ENSMUST00000193787 748 ntBASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp20Q8C6M1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Zfp783-201ENSMUST00000095946 670 ntBASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp20Q8C6M1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp20Q8C6M1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp20Q8C6M1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp20Q8C6M1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.03■□□□□ 0.8
Usp20Q8C6M1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Usp20Q8C6M1 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.03■□□□□ 0.8
Usp20Q8C6M1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp20Q8C6M1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp20Q8C6M1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp20Q8C6M1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp20Q8C6M1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp20Q8C6M1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp20Q8C6M1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp20Q8C6M1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp20Q8C6M1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp20Q8C6M1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp20Q8C6M1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Usp20Q8C6M1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms