Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ska3Q8C263 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ska3Q8C263 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ska3Q8C263 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ska3Q8C263 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.11■□□□□ 0.33
Ska3Q8C263 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ska3Q8C263 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ska3Q8C263 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Ska3Q8C263 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ska3Q8C263 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.11■□□□□ 0.33
Ska3Q8C263 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Gm22325-201ENSMUST00000158904 308 ntBASIC17.1■□□□□ 0.33
Ska3Q8C263 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Gm5408-201ENSMUST00000197998 747 ntBASIC17.1■□□□□ 0.33
Ska3Q8C263 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.1■□□□□ 0.33
Ska3Q8C263 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.1■□□□□ 0.33
Ska3Q8C263 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ska3Q8C263 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ska3Q8C263 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ska3Q8C263 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.09■□□□□ 0.33
Ska3Q8C263 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ska3Q8C263 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ska3Q8C263 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ska3Q8C263 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.09■□□□□ 0.33
Ska3Q8C263 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.09■□□□□ 0.33
Ska3Q8C263 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ska3Q8C263 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.09■□□□□ 0.33
Ska3Q8C263 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ska3Q8C263 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.09■□□□□ 0.33
Ska3Q8C263 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ska3Q8C263 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ska3Q8C263 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska3Q8C263 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska3Q8C263 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska3Q8C263 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska3Q8C263 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.08■□□□□ 0.32
Ska3Q8C263 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.08■□□□□ 0.32
Ska3Q8C263 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.08■□□□□ 0.32
Ska3Q8C263 Rab3c-203ENSMUST00000224180 967 ntBASIC17.08■□□□□ 0.32
Ska3Q8C263 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska3Q8C263 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska3Q8C263 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ska3Q8C263 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.07■□□□□ 0.32
Ska3Q8C263 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska3Q8C263 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska3Q8C263 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska3Q8C263 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska3Q8C263 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ska3Q8C263 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.06■□□□□ 0.32
Ska3Q8C263 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.06■□□□□ 0.32
Ska3Q8C263 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.06■□□□□ 0.32
Ska3Q8C263 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska3Q8C263 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska3Q8C263 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska3Q8C263 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.05■□□□□ 0.32
Ska3Q8C263 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska3Q8C263 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Ska3Q8C263 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska3Q8C263 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska3Q8C263 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ska3Q8C263 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.05■□□□□ 0.32
Ska3Q8C263 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.05■□□□□ 0.32
Ska3Q8C263 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ska3Q8C263 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska3Q8C263 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska3Q8C263 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ska3Q8C263 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms