Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trub1Q8C0D0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Trub1Q8C0D0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trub1Q8C0D0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trub1Q8C0D0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.77■□□□□ 0.59
Trub1Q8C0D0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trub1Q8C0D0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Gm13148-201ENSMUST00000118892 745 ntBASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trub1Q8C0D0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Gm37179-201ENSMUST00000194862 823 ntBASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trub1Q8C0D0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Trub1Q8C0D0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trub1Q8C0D0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Mir5133-201ENSMUST00000174955 77 ntBASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trub1Q8C0D0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trub1Q8C0D0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms