Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf2Q8BZT2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.45■□□□□ 0.54
Sh3rf2Q8BZT2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf2Q8BZT2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf2Q8BZT2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sh3rf2Q8BZT2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.45■□□□□ 0.54
Sh3rf2Q8BZT2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Gm15375-201ENSMUST00000119510 849 ntBASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sh3rf2Q8BZT2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sh3rf2Q8BZT2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Gm37055-201ENSMUST00000191866 133 ntBASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Gm43183-201ENSMUST00000200632 547 ntBASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3rf2Q8BZT2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Gm18025-201ENSMUST00000221733 862 ntBASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3rf2Q8BZT2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Gm42545-201ENSMUST00000202755 922 ntBASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 BC021767-201ENSMUST00000126387 1716 ntBASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.4■□□□□ 0.54
Sh3rf2Q8BZT2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3rf2Q8BZT2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3rf2Q8BZT2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms