Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trerf1Q8BXJ2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trerf1Q8BXJ2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trerf1Q8BXJ2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trerf1Q8BXJ2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trerf1Q8BXJ2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trerf1Q8BXJ2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trerf1Q8BXJ2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trerf1Q8BXJ2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trerf1Q8BXJ2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trerf1Q8BXJ2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trerf1Q8BXJ2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms