Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Chmp2bQ8BJF9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chmp2bQ8BJF9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chmp2bQ8BJF9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chmp2bQ8BJF9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Gm9988-201ENSMUST00000069786 435 ntBASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chmp2bQ8BJF9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2bQ8BJF9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Chmp2bQ8BJF9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2bQ8BJF9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.58■□□□□ 0.57
Chmp2bQ8BJF9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2bQ8BJF9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2bQ8BJF9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Chmp2bQ8BJF9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Chmp2bQ8BJF9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.58■□□□□ 0.56
Chmp2bQ8BJF9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Chmp2bQ8BJF9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp2bQ8BJF9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.58■□□□□ 0.56
Chmp2bQ8BJF9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.58■□□□□ 0.56
Chmp2bQ8BJF9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp2bQ8BJF9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp2bQ8BJF9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp2bQ8BJF9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms