Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Gm3375-201ENSMUST00000203929 796 ntBASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Timm23-208ENSMUST00000226683 750 ntBASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.13■□□□□ 0.81
Tdp1Q8BJ37 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tdp1Q8BJ37 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tdp1Q8BJ37 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tdp1Q8BJ37 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tdp1Q8BJ37 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.11■□□□□ 0.81
Tdp1Q8BJ37 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Tdp1Q8BJ37 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tdp1Q8BJ37 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tdp1Q8BJ37 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tdp1Q8BJ37 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tdp1Q8BJ37 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Tdp1Q8BJ37 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tdp1Q8BJ37 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Tdp1Q8BJ37 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tdp1Q8BJ37 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tdp1Q8BJ37 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.08■□□□□ 0.81
Tdp1Q8BJ37 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tdp1Q8BJ37 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Tdp1Q8BJ37 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tdp1Q8BJ37 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tdp1Q8BJ37 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tdp1Q8BJ37 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tdp1Q8BJ37 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tdp1Q8BJ37 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.08■□□□□ 0.8
Tdp1Q8BJ37 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tdp1Q8BJ37 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.08■□□□□ 0.8
Tdp1Q8BJ37 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tdp1Q8BJ37 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tdp1Q8BJ37 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tdp1Q8BJ37 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp1Q8BJ37 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Gm7889-201ENSMUST00000185591 958 ntBASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp1Q8BJ37 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.05■□□□□ 0.8
Tdp1Q8BJ37 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp1Q8BJ37 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp1Q8BJ37 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms