Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn3bQ8BHK2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn3bQ8BHK2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn3bQ8BHK2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn3bQ8BHK2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn3bQ8BHK2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn3bQ8BHK2 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn3bQ8BHK2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn3bQ8BHK2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms