Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.62■□□□□ 0.41
Smndc1Q8BGT7 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smndc1Q8BGT7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Gm43173-201ENSMUST00000202246 593 ntBASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 AA386476-201ENSMUST00000098781 1665 ntBASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smndc1Q8BGT7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smndc1Q8BGT7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Smndc1Q8BGT7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smndc1Q8BGT7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smndc1Q8BGT7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smndc1Q8BGT7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smndc1Q8BGT7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smndc1Q8BGT7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms