Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nipal3Q8BGN5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nipal3Q8BGN5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Nipal3Q8BGN5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nipal3Q8BGN5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nipal3Q8BGN5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Nipal3Q8BGN5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nipal3Q8BGN5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nipal3Q8BGN5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Nipal3Q8BGN5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Mir5133-201ENSMUST00000174955 77 ntBASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nipal3Q8BGN5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Gm12933-201ENSMUST00000120203 872 ntBASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Gm10602-201ENSMUST00000098239 609 ntBASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nipal3Q8BGN5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Gm7290-201ENSMUST00000104990 617 ntBASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Gm12918-201ENSMUST00000120234 636 ntBASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Gm15710-201ENSMUST00000121821 636 ntBASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Gm29257-201ENSMUST00000186115 639 ntBASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Gm5075-201ENSMUST00000196916 622 ntBASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nipal3Q8BGN5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nipal3Q8BGN5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nipal3Q8BGN5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms