Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim6Q8BGE7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim6Q8BGE7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim6Q8BGE7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim6Q8BGE7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim6Q8BGE7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim6Q8BGE7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim6Q8BGE7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim6Q8BGE7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim6Q8BGE7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim6Q8BGE7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim6Q8BGE7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim6Q8BGE7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim6Q8BGE7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Trim6Q8BGE7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms