Protein–RNA interactions for Protein: Q80YX1

Tnc, Tenascin, mousemouse

Predictions only

Length 2,110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TncQ80YX1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TncQ80YX1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TncQ80YX1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TncQ80YX1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TncQ80YX1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TncQ80YX1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TncQ80YX1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TncQ80YX1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Gm20760-201ENSMUST00000179197 648 ntBASIC15.22■□□□□ 0.03
TncQ80YX1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.22■□□□□ 0.03
TncQ80YX1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TncQ80YX1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TncQ80YX1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TncQ80YX1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TncQ80YX1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TncQ80YX1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TncQ80YX1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TncQ80YX1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TncQ80YX1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.21■□□□□ 0.03
TncQ80YX1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TncQ80YX1 Gm13158-201ENSMUST00000122007 736 ntBASIC15.21■□□□□ 0.03
TncQ80YX1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TncQ80YX1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.21■□□□□ 0.03
TncQ80YX1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.21■□□□□ 0.03
TncQ80YX1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.21■□□□□ 0.03
TncQ80YX1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TncQ80YX1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TncQ80YX1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TncQ80YX1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TncQ80YX1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TncQ80YX1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.2■□□□□ 0.02
TncQ80YX1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.2■□□□□ 0.02
TncQ80YX1 Zfp783-201ENSMUST00000095946 670 ntBASIC15.2■□□□□ 0.02
TncQ80YX1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TncQ80YX1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TncQ80YX1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.2■□□□□ 0.02
TncQ80YX1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Gm27275-201ENSMUST00000184318 272 ntBASIC15.2■□□□□ 0.02
TncQ80YX1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.2■□□□□ 0.02
TncQ80YX1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TncQ80YX1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.19■□□□□ 0.02
TncQ80YX1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TncQ80YX1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TncQ80YX1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.19■□□□□ 0.02
TncQ80YX1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TncQ80YX1 BC021767-201ENSMUST00000126387 1716 ntBASIC15.18■□□□□ 0.02
TncQ80YX1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TncQ80YX1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TncQ80YX1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TncQ80YX1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TncQ80YX1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TncQ80YX1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TncQ80YX1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TncQ80YX1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TncQ80YX1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.18■□□□□ 0.02
TncQ80YX1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TncQ80YX1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TncQ80YX1 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.18■□□□□ 0.02
TncQ80YX1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms