Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.4■□□□□ 0.06
Upk3bQ80YF6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Gm13241-201ENSMUST00000094493 780 ntBASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Upk3bQ80YF6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Gm38205-201ENSMUST00000192243 258 ntBASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Upk3bQ80YF6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Upk3bQ80YF6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Upk3bQ80YF6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bQ80YF6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms