Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm12085-201ENSMUST00000119263 940 ntBASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Tnrc18Q80WC3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Tnrc18Q80WC3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Tnrc18Q80WC3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Tnrc18Q80WC3 Gm25016-201ENSMUST00000158399 131 ntBASIC18.27■□□□□ 0.51
Tnrc18Q80WC3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Tnrc18Q80WC3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Tnrc18Q80WC3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnrc18Q80WC3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Mir2861-201ENSMUST00000175539 82 ntBASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnrc18Q80WC3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Gm17807-201ENSMUST00000186869 298 ntBASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.25■□□□□ 0.51
Tnrc18Q80WC3 Gm27704-201ENSMUST00000185094 107 ntBASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnrc18Q80WC3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Gm25925-201ENSMUST00000158314 306 ntBASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Gm2274-201ENSMUST00000184539 609 ntBASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.23■□□□□ 0.51
Tnrc18Q80WC3 Gm16061-201ENSMUST00000122167 857 ntBASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnrc18Q80WC3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnrc18Q80WC3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Gm18669-201ENSMUST00000216049 778 ntBASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Gm7791-201ENSMUST00000219066 539 ntBASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Gm9013-201ENSMUST00000132939 882 ntBASIC18.2■□□□□ 0.5
Tnrc18Q80WC3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms