Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.24■□□□□ 0.51
Usp8Q80U87 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Usp8Q80U87 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp8Q80U87 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.24■□□□□ 0.51
Usp8Q80U87 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 Gm9988-201ENSMUST00000069786 435 ntBASIC18.24■□□□□ 0.51
Usp8Q80U87 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp8Q80U87 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp8Q80U87 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Usp8Q80U87 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.23■□□□□ 0.51
Usp8Q80U87 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp8Q80U87 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.22■□□□□ 0.51
Usp8Q80U87 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.22■□□□□ 0.51
Usp8Q80U87 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Usp8Q80U87 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp8Q80U87 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Gm13146-201ENSMUST00000118508 780 ntBASIC18.21■□□□□ 0.51
Usp8Q80U87 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp8Q80U87 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Usp8Q80U87 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Usp8Q80U87 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Usp8Q80U87 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Usp8Q80U87 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Usp8Q80U87 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp8Q80U87 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp8Q80U87 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp8Q80U87 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.2■□□□□ 0.5
Usp8Q80U87 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp8Q80U87 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp8Q80U87 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.2■□□□□ 0.5
Usp8Q80U87 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.2■□□□□ 0.5
Usp8Q80U87 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp8Q80U87 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp8Q80U87 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Usp8Q80U87 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp8Q80U87 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp8Q80U87 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.19■□□□□ 0.5
Usp8Q80U87 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Reep4-203ENSMUST00000226563 1444 ntBASIC18.19■□□□□ 0.5
Usp8Q80U87 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Usp8Q80U87 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Usp8Q80U87 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp8Q80U87 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp8Q80U87 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp8Q80U87 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Usp8Q80U87 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usp8Q80U87 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.18■□□□□ 0.5
Usp8Q80U87 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp8Q80U87 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms