Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Gm15378-201ENSMUST00000121894 207 ntBASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh19Q80TF3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh19Q80TF3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh19Q80TF3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh19Q80TF3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdh19Q80TF3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Gm6576-201ENSMUST00000169678 883 ntBASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh19Q80TF3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh19Q80TF3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms