Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh8Q7TSK3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh8Q7TSK3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Pcdh8Q7TSK3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh8Q7TSK3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh8Q7TSK3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh8Q7TSK3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh8Q7TSK3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh8Q7TSK3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 BC021767-201ENSMUST00000126387 1716 ntBASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh8Q7TSK3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Flg-201ENSMUST00000050758 1488 ntBASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Mir6982-201ENSMUST00000184354 68 ntBASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.88■□□□□ 0.45
Pcdh8Q7TSK3 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms