Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.71■□□□□ 0.43
Scn4bQ7M729 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.71■□□□□ 0.43
Scn4bQ7M729 Gm6365-201ENSMUST00000054711 744 ntBASIC17.71■□□□□ 0.43
Scn4bQ7M729 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn4bQ7M729 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn4bQ7M729 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scn4bQ7M729 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Scn4bQ7M729 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scn4bQ7M729 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.7■□□□□ 0.42
Scn4bQ7M729 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scn4bQ7M729 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn4bQ7M729 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.69■□□□□ 0.42
Scn4bQ7M729 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.69■□□□□ 0.42
Scn4bQ7M729 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn4bQ7M729 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn4bQ7M729 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Gm37179-201ENSMUST00000194862 823 ntBASIC17.67■□□□□ 0.42
Scn4bQ7M729 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn4bQ7M729 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.67■□□□□ 0.42
Scn4bQ7M729 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn4bQ7M729 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Gm22325-201ENSMUST00000158904 308 ntBASIC17.66■□□□□ 0.42
Scn4bQ7M729 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.66■□□□□ 0.42
Scn4bQ7M729 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn4bQ7M729 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn4bQ7M729 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms