Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Tgds-204ENSMUST00000228543 1594 ntBASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nup98Q6PFD9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Gm10231-201ENSMUST00000181584 441 ntBASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Gm10175-202ENSMUST00000208752 441 ntBASIC21.6■■□□□ 1.05
Nup98Q6PFD9 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nup98Q6PFD9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Gm13559-201ENSMUST00000120476 863 ntBASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
Nup98Q6PFD9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nup98Q6PFD9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nup98Q6PFD9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nup98Q6PFD9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nup98Q6PFD9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nup98Q6PFD9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nup98Q6PFD9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nup98Q6PFD9 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nup98Q6PFD9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nup98Q6PFD9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nup98Q6PFD9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nup98Q6PFD9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nup98Q6PFD9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nup98Q6PFD9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Gm12085-201ENSMUST00000119263 940 ntBASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nup98Q6PFD9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Nup98Q6PFD9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nup98Q6PFD9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms