Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Rps24-207ENSMUST00000224568 714 ntBASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 AA386476-201ENSMUST00000098781 1665 ntBASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf220Q6PDX6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf220Q6PDX6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf220Q6PDX6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf220Q6PDX6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf220Q6PDX6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf220Q6PDX6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf220Q6PDX6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Gm14117-201ENSMUST00000122417 843 ntBASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rnf220Q6PDX6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf220Q6PDX6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf220Q6PDX6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf220Q6PDX6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms