Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Clcn1Q64347 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Clcn1Q64347 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn1Q64347 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn1Q64347 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn1Q64347 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Clcn1Q64347 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC23.04■■□□□ 1.28
Clcn1Q64347 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn1Q64347 Gm37292-201ENSMUST00000192062 758 ntBASIC23.04■■□□□ 1.28
Clcn1Q64347 Gm21814-202ENSMUST00000203277 873 ntBASIC23.04■■□□□ 1.28
Clcn1Q64347 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn1Q64347 Gm8668-201ENSMUST00000120559 1447 ntBASIC23.04■■□□□ 1.28
Clcn1Q64347 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn1Q64347 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC23.04■■□□□ 1.28
Clcn1Q64347 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn1Q64347 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC23.02■■□□□ 1.28
Clcn1Q64347 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn1Q64347 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC23.02■■□□□ 1.28
Clcn1Q64347 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn1Q64347 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23.02■■□□□ 1.28
Clcn1Q64347 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.02■■□□□ 1.28
Clcn1Q64347 Gm10138-203ENSMUST00000206952 366 ntBASIC23.02■■□□□ 1.28
Clcn1Q64347 Gm30025-201ENSMUST00000218555 728 ntBASIC23.02■■□□□ 1.28
Clcn1Q64347 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn1Q64347 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC23.02■■□□□ 1.28
Clcn1Q64347 Gm38342-201ENSMUST00000195710 2980 ntBASIC23.02■■□□□ 1.28
Clcn1Q64347 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn1Q64347 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.02■■□□□ 1.28
Clcn1Q64347 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn1Q64347 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.27
Clcn1Q64347 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Gm15375-201ENSMUST00000119510 849 ntBASIC23.01■■□□□ 1.27
Clcn1Q64347 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC23.01■■□□□ 1.27
Clcn1Q64347 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.01■■□□□ 1.27
Clcn1Q64347 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Clcn1Q64347 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC23.01■■□□□ 1.27
Clcn1Q64347 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC23.01■■□□□ 1.27
Clcn1Q64347 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn1Q64347 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Clcn1Q64347 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23■■□□□ 1.27
Clcn1Q64347 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
Clcn1Q64347 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Clcn1Q64347 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Clcn1Q64347 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC23■■□□□ 1.27
Clcn1Q64347 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23■■□□□ 1.27
Clcn1Q64347 Gm11539-201ENSMUST00000119837 557 ntBASIC23■■□□□ 1.27
Clcn1Q64347 Gm13436-201ENSMUST00000120418 567 ntBASIC23■■□□□ 1.27
Clcn1Q64347 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23■■□□□ 1.27
Clcn1Q64347 Otx2os1-204ENSMUST00000227221 751 ntBASIC23■■□□□ 1.27
Clcn1Q64347 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC23■■□□□ 1.27
Clcn1Q64347 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23■■□□□ 1.27
Clcn1Q64347 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC23■■□□□ 1.27
Clcn1Q64347 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Clcn1Q64347 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Clcn1Q64347 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC23■■□□□ 1.27
Clcn1Q64347 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn1Q64347 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn1Q64347 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn1Q64347 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC22.99■■□□□ 1.27
Clcn1Q64347 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Clcn1Q64347 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Clcn1Q64347 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.98■■□□□ 1.27
Clcn1Q64347 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.98■■□□□ 1.27
Clcn1Q64347 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn1Q64347 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn1Q64347 Gm13559-201ENSMUST00000120476 863 ntBASIC22.98■■□□□ 1.27
Clcn1Q64347 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn1Q64347 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn1Q64347 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn1Q64347 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn1Q64347 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn1Q64347 AC124581.1-201ENSMUST00000225416 1399 ntBASIC22.98■■□□□ 1.27
Clcn1Q64347 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.98■■□□□ 1.27
Clcn1Q64347 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Clcn1Q64347 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms