Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Six3Q62233 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.78■□□□□ 0.44
Six3Q62233 Nespas-201ENSMUST00000143738 1083 ntBASIC17.78■□□□□ 0.44
Six3Q62233 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Six3Q62233 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.78■□□□□ 0.44
Six3Q62233 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Six3Q62233 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Six3Q62233 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Six3Q62233 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Six3Q62233 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.77■□□□□ 0.44
Six3Q62233 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.77■□□□□ 0.44
Six3Q62233 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Six3Q62233 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Six3Q62233 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Six3Q62233 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Six3Q62233 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Six3Q62233 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six3Q62233 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Six3Q62233 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.76■□□□□ 0.43
Six3Q62233 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Six3Q62233 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.76■□□□□ 0.43
Six3Q62233 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.76■□□□□ 0.43
Six3Q62233 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six3Q62233 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.76■□□□□ 0.43
Six3Q62233 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six3Q62233 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Six3Q62233 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six3Q62233 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Six3Q62233 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Six3Q62233 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Six3Q62233 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.75■□□□□ 0.43
Six3Q62233 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Six3Q62233 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Six3Q62233 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Gm10033-202ENSMUST00000211874 928 ntBASIC17.75■□□□□ 0.43
Six3Q62233 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.75■□□□□ 0.43
Six3Q62233 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Six3Q62233 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six3Q62233 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.74■□□□□ 0.43
Six3Q62233 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Six3Q62233 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.74■□□□□ 0.43
Six3Q62233 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.74■□□□□ 0.43
Six3Q62233 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.74■□□□□ 0.43
Six3Q62233 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.74■□□□□ 0.43
Six3Q62233 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six3Q62233 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.74■□□□□ 0.43
Six3Q62233 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six3Q62233 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six3Q62233 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six3Q62233 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six3Q62233 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Six3Q62233 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six3Q62233 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six3Q62233 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six3Q62233 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six3Q62233 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Six3Q62233 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six3Q62233 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Six3Q62233 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six3Q62233 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Six3Q62233 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.72■□□□□ 0.43
Six3Q62233 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Six3Q62233 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six3Q62233 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six3Q62233 Tgds-204ENSMUST00000228543 1594 ntBASIC17.72■□□□□ 0.43
Six3Q62233 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Six3Q62233 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six3Q62233 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six3Q62233 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six3Q62233 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.71■□□□□ 0.43
Six3Q62233 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six3Q62233 Gm7514-201ENSMUST00000209475 934 ntBASIC17.71■□□□□ 0.43
Six3Q62233 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six3Q62233 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six3Q62233 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Six3Q62233 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Six3Q62233 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms