Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa2Q62193 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa2Q62193 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rpa2Q62193 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa2Q62193 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa2Q62193 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa2Q62193 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa2Q62193 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa2Q62193 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpa2Q62193 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Gm5408-201ENSMUST00000197998 747 ntBASIC16.71■□□□□ 0.27
Rpa2Q62193 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rpa2Q62193 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.71■□□□□ 0.27
Rpa2Q62193 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.71■□□□□ 0.27
Rpa2Q62193 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpa2Q62193 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.7■□□□□ 0.26
Rpa2Q62193 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rpa2Q62193 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.7■□□□□ 0.26
Rpa2Q62193 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpa2Q62193 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.7■□□□□ 0.26
Rpa2Q62193 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rpa2Q62193 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpa2Q62193 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.69■□□□□ 0.26
Rpa2Q62193 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa2Q62193 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa2Q62193 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa2Q62193 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa2Q62193 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa2Q62193 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rpa2Q62193 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Rpa2Q62193 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa2Q62193 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpa2Q62193 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.67■□□□□ 0.26
Rpa2Q62193 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rpa2Q62193 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rpa2Q62193 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rpa2Q62193 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.67■□□□□ 0.26
Rpa2Q62193 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rpa2Q62193 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rpa2Q62193 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpa2Q62193 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.66■□□□□ 0.26
Rpa2Q62193 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa2Q62193 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa2Q62193 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa2Q62193 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa2Q62193 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpa2Q62193 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpa2Q62193 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa2Q62193 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rpa2Q62193 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa2Q62193 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa2Q62193 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rpa2Q62193 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa2Q62193 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.65■□□□□ 0.26
Rpa2Q62193 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.65■□□□□ 0.26
Rpa2Q62193 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms