Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
VcanQ62059 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VcanQ62059 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VcanQ62059 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
VcanQ62059 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VcanQ62059 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
VcanQ62059 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.18■□□□□ 0.34
VcanQ62059 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VcanQ62059 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.17■□□□□ 0.34
VcanQ62059 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.17■□□□□ 0.34
VcanQ62059 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.17■□□□□ 0.34
VcanQ62059 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
VcanQ62059 Mir5130-201ENSMUST00000175160 84 ntBASIC17.17■□□□□ 0.34
VcanQ62059 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.17■□□□□ 0.34
VcanQ62059 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
VcanQ62059 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
VcanQ62059 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.16■□□□□ 0.34
VcanQ62059 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
VcanQ62059 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VcanQ62059 Gm10138-203ENSMUST00000206952 366 ntBASIC17.16■□□□□ 0.34
VcanQ62059 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.16■□□□□ 0.34
VcanQ62059 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
VcanQ62059 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.16■□□□□ 0.34
VcanQ62059 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
VcanQ62059 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.16■□□□□ 0.34
VcanQ62059 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
VcanQ62059 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
VcanQ62059 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VcanQ62059 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.15■□□□□ 0.34
VcanQ62059 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
VcanQ62059 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VcanQ62059 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VcanQ62059 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VcanQ62059 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VcanQ62059 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.15■□□□□ 0.34
VcanQ62059 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
VcanQ62059 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
VcanQ62059 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.15■□□□□ 0.34
VcanQ62059 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
VcanQ62059 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
VcanQ62059 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
VcanQ62059 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.14■□□□□ 0.33
VcanQ62059 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.14■□□□□ 0.33
VcanQ62059 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.14■□□□□ 0.33
VcanQ62059 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
VcanQ62059 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.14■□□□□ 0.33
VcanQ62059 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.14■□□□□ 0.33
VcanQ62059 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VcanQ62059 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VcanQ62059 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
VcanQ62059 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Notumos-201ENSMUST00000151998 2659 ntBASIC17.13■□□□□ 0.33
VcanQ62059 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VcanQ62059 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VcanQ62059 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VcanQ62059 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VcanQ62059 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.12■□□□□ 0.33
VcanQ62059 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.12■□□□□ 0.33
VcanQ62059 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.12■□□□□ 0.33
VcanQ62059 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VcanQ62059 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VcanQ62059 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms