Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rai1Q61818 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.65■□□□□ 0.42
Rai1Q61818 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Rai1Q61818 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.64■□□□□ 0.42
Rai1Q61818 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rai1Q61818 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rai1Q61818 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.64■□□□□ 0.41
Rai1Q61818 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rai1Q61818 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rai1Q61818 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rai1Q61818 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rai1Q61818 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.63■□□□□ 0.41
Rai1Q61818 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rai1Q61818 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rai1Q61818 Gm10013-201ENSMUST00000106074 672 ntBASIC17.63■□□□□ 0.41
Rai1Q61818 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.63■□□□□ 0.41
Rai1Q61818 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Gm21362-201ENSMUST00000194272 928 ntBASIC17.63■□□□□ 0.41
Rai1Q61818 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rai1Q61818 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rai1Q61818 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rai1Q61818 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rai1Q61818 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rai1Q61818 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.62■□□□□ 0.41
Rai1Q61818 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rai1Q61818 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rai1Q61818 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rai1Q61818 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.62■□□□□ 0.41
Rai1Q61818 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rai1Q61818 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rai1Q61818 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rai1Q61818 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rai1Q61818 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rai1Q61818 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rai1Q61818 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rai1Q61818 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rai1Q61818 Gm23634-201ENSMUST00000175071 91 ntBASIC17.61■□□□□ 0.41
Rai1Q61818 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.61■□□□□ 0.41
Rai1Q61818 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rai1Q61818 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Rai1Q61818 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rai1Q61818 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.61■□□□□ 0.41
Rai1Q61818 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.61■□□□□ 0.41
Rai1Q61818 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.61■□□□□ 0.41
Rai1Q61818 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rai1Q61818 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.61■□□□□ 0.41
Rai1Q61818 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.6■□□□□ 0.41
Rai1Q61818 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rai1Q61818 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rai1Q61818 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rai1Q61818 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rai1Q61818 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rai1Q61818 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rai1Q61818 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.59■□□□□ 0.41
Rai1Q61818 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rai1Q61818 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rai1Q61818 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rai1Q61818 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rai1Q61818 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rai1Q61818 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rai1Q61818 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rai1Q61818 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.58■□□□□ 0.41
Rai1Q61818 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rai1Q61818 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rai1Q61818 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rai1Q61818 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rai1Q61818 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rai1Q61818 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rai1Q61818 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rai1Q61818 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rai1Q61818 Gm6345-202ENSMUST00000180900 204 ntBASIC17.58■□□□□ 0.4
Rai1Q61818 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.58■□□□□ 0.4
Rai1Q61818 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rai1Q61818 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rai1Q61818 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rai1Q61818 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rai1Q61818 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 Gm33142-201ENSMUST00000193913 867 ntBASIC17.57■□□□□ 0.4
Rai1Q61818 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rai1Q61818 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms