Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.76■□□□□ 0.27
Clcn4Q61418 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Clcn4Q61418 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn4Q61418 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn4Q61418 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn4Q61418 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Clcn4Q61418 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.75■□□□□ 0.27
Clcn4Q61418 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Clcn4Q61418 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.75■□□□□ 0.27
Clcn4Q61418 Gm13234-201ENSMUST00000120010 747 ntBASIC16.75■□□□□ 0.27
Clcn4Q61418 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.75■□□□□ 0.27
Clcn4Q61418 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.75■□□□□ 0.27
Clcn4Q61418 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Clcn4Q61418 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.75■□□□□ 0.27
Clcn4Q61418 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Clcn4Q61418 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.74■□□□□ 0.27
Clcn4Q61418 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.74■□□□□ 0.27
Clcn4Q61418 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.74■□□□□ 0.27
Clcn4Q61418 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Clcn4Q61418 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Clcn4Q61418 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Clcn4Q61418 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Clcn4Q61418 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.73■□□□□ 0.27
Clcn4Q61418 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.73■□□□□ 0.27
Clcn4Q61418 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.73■□□□□ 0.27
Clcn4Q61418 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn4Q61418 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Clcn4Q61418 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.72■□□□□ 0.27
Clcn4Q61418 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Clcn4Q61418 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Clcn4Q61418 Gm10602-201ENSMUST00000098239 609 ntBASIC16.72■□□□□ 0.27
Clcn4Q61418 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.72■□□□□ 0.27
Clcn4Q61418 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn4Q61418 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.72■□□□□ 0.27
Clcn4Q61418 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Clcn4Q61418 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.71■□□□□ 0.27
Clcn4Q61418 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Clcn4Q61418 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn4Q61418 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcn4Q61418 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms