Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdf4Q61112 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdf4Q61112 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdf4Q61112 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.48■□□□□ 0.55
Sdf4Q61112 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdf4Q61112 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sdf4Q61112 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdf4Q61112 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sdf4Q61112 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.47■□□□□ 0.55
Sdf4Q61112 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sdf4Q61112 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sdf4Q61112 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sdf4Q61112 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sdf4Q61112 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.46■□□□□ 0.55
Sdf4Q61112 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Sdf4Q61112 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.46■□□□□ 0.55
Sdf4Q61112 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Sdf4Q61112 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sdf4Q61112 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sdf4Q61112 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sdf4Q61112 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sdf4Q61112 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sdf4Q61112 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdf4Q61112 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdf4Q61112 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
Sdf4Q61112 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdf4Q61112 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.45■□□□□ 0.54
Sdf4Q61112 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdf4Q61112 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdf4Q61112 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sdf4Q61112 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdf4Q61112 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdf4Q61112 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sdf4Q61112 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.45■□□□□ 0.54
Sdf4Q61112 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sdf4Q61112 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Sdf4Q61112 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.44■□□□□ 0.54
Sdf4Q61112 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sdf4Q61112 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sdf4Q61112 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.44■□□□□ 0.54
Sdf4Q61112 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sdf4Q61112 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.43■□□□□ 0.54
Sdf4Q61112 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdf4Q61112 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdf4Q61112 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdf4Q61112 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdf4Q61112 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdf4Q61112 Gm13148-201ENSMUST00000118892 745 ntBASIC18.43■□□□□ 0.54
Sdf4Q61112 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.43■□□□□ 0.54
Sdf4Q61112 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sdf4Q61112 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.43■□□□□ 0.54
Sdf4Q61112 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sdf4Q61112 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sdf4Q61112 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sdf4Q61112 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sdf4Q61112 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Sdf4Q61112 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.43■□□□□ 0.54
Sdf4Q61112 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdf4Q61112 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sdf4Q61112 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdf4Q61112 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.42■□□□□ 0.54
Sdf4Q61112 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sdf4Q61112 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.42■□□□□ 0.54
Sdf4Q61112 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.42■□□□□ 0.54
Sdf4Q61112 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sdf4Q61112 Gm10602-201ENSMUST00000098239 609 ntBASIC18.42■□□□□ 0.54
Sdf4Q61112 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdf4Q61112 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdf4Q61112 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdf4Q61112 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sdf4Q61112 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sdf4Q61112 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sdf4Q61112 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms