Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.05■□□□□ 0.48
Sim1Q61045 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Sim1Q61045 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim1Q61045 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.05■□□□□ 0.48
Sim1Q61045 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sim1Q61045 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.05■□□□□ 0.48
Sim1Q61045 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.05■□□□□ 0.48
Sim1Q61045 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sim1Q61045 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sim1Q61045 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sim1Q61045 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sim1Q61045 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.04■□□□□ 0.48
Sim1Q61045 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.04■□□□□ 0.48
Sim1Q61045 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sim1Q61045 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.04■□□□□ 0.48
Sim1Q61045 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.04■□□□□ 0.48
Sim1Q61045 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.04■□□□□ 0.48
Sim1Q61045 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.04■□□□□ 0.48
Sim1Q61045 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Sim1Q61045 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.04■□□□□ 0.48
Sim1Q61045 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sim1Q61045 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sim1Q61045 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Sim1Q61045 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.04■□□□□ 0.48
Sim1Q61045 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Gm11249-201ENSMUST00000117071 859 ntBASIC18.03■□□□□ 0.48
Sim1Q61045 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.03■□□□□ 0.48
Sim1Q61045 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.03■□□□□ 0.48
Sim1Q61045 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sim1Q61045 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.03■□□□□ 0.48
Sim1Q61045 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sim1Q61045 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sim1Q61045 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sim1Q61045 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Sim1Q61045 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sim1Q61045 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sim1Q61045 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.02■□□□□ 0.48
Sim1Q61045 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.02■□□□□ 0.48
Sim1Q61045 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sim1Q61045 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Sim1Q61045 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sim1Q61045 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sim1Q61045 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sim1Q61045 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.02■□□□□ 0.47
Sim1Q61045 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.01■□□□□ 0.47
Sim1Q61045 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sim1Q61045 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sim1Q61045 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.01■□□□□ 0.47
Sim1Q61045 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Sim1Q61045 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Sim1Q61045 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Mir1199-201ENSMUST00000117015 119 ntBASIC18.01■□□□□ 0.47
Sim1Q61045 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.01■□□□□ 0.47
Sim1Q61045 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sim1Q61045 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sim1Q61045 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms