Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Satb1Q60611 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Satb1Q60611 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.79■□□□□ 0.6
Satb1Q60611 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.79■□□□□ 0.6
Satb1Q60611 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.79■□□□□ 0.6
Satb1Q60611 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.79■□□□□ 0.6
Satb1Q60611 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Satb1Q60611 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.79■□□□□ 0.6
Satb1Q60611 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.79■□□□□ 0.6
Satb1Q60611 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Satb1Q60611 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Satb1Q60611 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Satb1Q60611 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Satb1Q60611 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Satb1Q60611 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.78■□□□□ 0.6
Satb1Q60611 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Satb1Q60611 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Satb1Q60611 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Satb1Q60611 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Satb1Q60611 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Satb1Q60611 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Satb1Q60611 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Satb1Q60611 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Satb1Q60611 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Satb1Q60611 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.77■□□□□ 0.59
Satb1Q60611 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Satb1Q60611 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Satb1Q60611 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Satb1Q60611 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Satb1Q60611 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.76■□□□□ 0.59
Satb1Q60611 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Satb1Q60611 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Satb1Q60611 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.76■□□□□ 0.59
Satb1Q60611 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.76■□□□□ 0.59
Satb1Q60611 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Satb1Q60611 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Satb1Q60611 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Satb1Q60611 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Satb1Q60611 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Gm30025-201ENSMUST00000218555 728 ntBASIC18.75■□□□□ 0.59
Satb1Q60611 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.75■□□□□ 0.59
Satb1Q60611 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Satb1Q60611 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Satb1Q60611 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Satb1Q60611 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Satb1Q60611 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.74■□□□□ 0.59
Satb1Q60611 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Satb1Q60611 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Satb1Q60611 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.74■□□□□ 0.59
Satb1Q60611 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.74■□□□□ 0.59
Satb1Q60611 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.74■□□□□ 0.59
Satb1Q60611 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Satb1Q60611 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.73■□□□□ 0.59
Satb1Q60611 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.73■□□□□ 0.59
Satb1Q60611 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Satb1Q60611 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Satb1Q60611 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Satb1Q60611 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.73■□□□□ 0.59
Satb1Q60611 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Satb1Q60611 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms