Protein–RNA interactions for Protein: Q5SV66

Ccdc42, Coiled-coil domain-containing protein 42, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42Q5SV66 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc42Q5SV66 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Gm38205-201ENSMUST00000192243 258 ntBASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc42Q5SV66 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc42Q5SV66 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc42Q5SV66 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc42Q5SV66 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Gm40848-201ENSMUST00000221998 324 ntBASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc42Q5SV66 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc42Q5SV66 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Ccdc42Q5SV66 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc42Q5SV66 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Ccdc42Q5SV66 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc42Q5SV66 Gm26833-201ENSMUST00000180899 440 ntBASIC19.58■□□□□ 0.72
Ccdc42Q5SV66 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms