Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav2Q5R1I9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav2Q5R1I9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Gm5643-201ENSMUST00000117081 966 ntBASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Gm13158-201ENSMUST00000122007 736 ntBASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav2Q5R1I9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav2Q5R1I9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav2Q5R1I9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav2Q5R1I9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav2Q5R1I9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav2Q5R1I9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav2Q5R1I9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav2Q5R1I9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav2Q5R1I9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms