Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-1Q5R1I8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Gm7199-201ENSMUST00000118327 1485 ntBASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-1Q5R1I8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-1Q5R1I8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav3-1Q5R1I8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Gm8969-201ENSMUST00000199694 526 ntBASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-1Q5R1I8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-1Q5R1I8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-1Q5R1I8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms