Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 AV356131-201ENSMUST00000206201 750 ntBASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav5d-4Q5R1F6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav5d-4Q5R1F6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav5d-4Q5R1F6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Gm26571-201ENSMUST00000181399 666 ntBASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav5d-4Q5R1F6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav5d-4Q5R1F6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms