Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8d-2Q5R1B6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8d-2Q5R1B6 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.79■□□□□ 0.44
Trav8d-2Q5R1B6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav8d-2Q5R1B6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Gm22697-201ENSMUST00000175194 63 ntBASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav8d-2Q5R1B6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Gm25016-201ENSMUST00000158399 131 ntBASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Gm38027-201ENSMUST00000192315 235 ntBASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav8d-2Q5R1B6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav8d-2Q5R1B6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav8d-2Q5R1B6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav8d-2Q5R1B6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trav8d-2Q5R1B6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 Ank2-226ENSMUST00000189368 339 ntBASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8d-2Q5R1B6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Mir2861-201ENSMUST00000175539 82 ntBASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8d-2Q5R1B6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trav8d-2Q5R1B6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms