Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Urb1Q571H0 Gm3375-201ENSMUST00000203929 796 ntBASIC16.71■□□□□ 0.27
Urb1Q571H0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Urb1Q571H0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.7■□□□□ 0.26
Urb1Q571H0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Gm6345-202ENSMUST00000180900 204 ntBASIC16.7■□□□□ 0.26
Urb1Q571H0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Urb1Q571H0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.69■□□□□ 0.26
Urb1Q571H0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Urb1Q571H0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.69■□□□□ 0.26
Urb1Q571H0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Urb1Q571H0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Urb1Q571H0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.68■□□□□ 0.26
Urb1Q571H0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Urb1Q571H0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Urb1Q571H0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Urb1Q571H0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.68■□□□□ 0.26
Urb1Q571H0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Urb1Q571H0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Urb1Q571H0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.67■□□□□ 0.26
Urb1Q571H0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.67■□□□□ 0.26
Urb1Q571H0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Urb1Q571H0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.67■□□□□ 0.26
Urb1Q571H0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Gm10013-201ENSMUST00000106074 672 ntBASIC16.67■□□□□ 0.26
Urb1Q571H0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Urb1Q571H0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.67■□□□□ 0.26
Urb1Q571H0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Urb1Q571H0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Gm15375-201ENSMUST00000119510 849 ntBASIC16.66■□□□□ 0.26
Urb1Q571H0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.66■□□□□ 0.26
Urb1Q571H0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.66■□□□□ 0.26
Urb1Q571H0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Urb1Q571H0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.66■□□□□ 0.26
Urb1Q571H0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Urb1Q571H0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Urb1Q571H0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Urb1Q571H0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.65■□□□□ 0.26
Urb1Q571H0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.65■□□□□ 0.26
Urb1Q571H0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Urb1Q571H0 Gm12382-201ENSMUST00000122005 922 ntBASIC16.65■□□□□ 0.26
Urb1Q571H0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.65■□□□□ 0.26
Urb1Q571H0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Urb1Q571H0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Urb1Q571H0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Urb1Q571H0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Urb1Q571H0 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms