Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Gm715-201ENSMUST00000117865 831 ntBASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.25■□□□□ 0.99
Prpf38aQ4FK66 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf38aQ4FK66 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf38aQ4FK66 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf38aQ4FK66 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf38aQ4FK66 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf38aQ4FK66 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf38aQ4FK66 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Gm18025-201ENSMUST00000221733 862 ntBASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prpf38aQ4FK66 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prpf38aQ4FK66 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Prpf38aQ4FK66 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Mir6349-201ENSMUST00000184059 97 ntBASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Gm43183-201ENSMUST00000200632 547 ntBASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.2■□□□□ 0.98
Prpf38aQ4FK66 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf38aQ4FK66 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.19■□□□□ 0.98
Prpf38aQ4FK66 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf38aQ4FK66 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.19■□□□□ 0.98
Prpf38aQ4FK66 Gm42545-201ENSMUST00000202755 922 ntBASIC21.19■□□□□ 0.98
Prpf38aQ4FK66 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf38aQ4FK66 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Prpf38aQ4FK66 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prpf38aQ4FK66 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.18■□□□□ 0.98
Prpf38aQ4FK66 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms