Protein–RNA interactions for Protein: Q3UYV9

Ncbp1, Nuclear cap-binding protein subunit 1, mousemouse

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp1Q3UYV9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
Ncbp1Q3UYV9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ncbp1Q3UYV9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Gm2399-201ENSMUST00000104944 225 ntBASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ncbp1Q3UYV9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ncbp1Q3UYV9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ncbp1Q3UYV9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ncbp1Q3UYV9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ncbp1Q3UYV9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Gm18666-201ENSMUST00000190039 958 ntBASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ncbp1Q3UYV9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Gm5643-201ENSMUST00000117081 966 ntBASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Gm22325-201ENSMUST00000158904 308 ntBASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Flg-201ENSMUST00000050758 1488 ntBASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ncbp1Q3UYV9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.68■■□□□ 1.06
Ncbp1Q3UYV9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms