Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smcr8Q3UMB5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.52■□□□□ 0.71
Smcr8Q3UMB5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smcr8Q3UMB5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smcr8Q3UMB5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 Gm11927-201ENSMUST00000118472 759 ntBASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 Mir7071-201ENSMUST00000184847 69 ntBASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smcr8Q3UMB5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Gm15378-201ENSMUST00000121894 207 ntBASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smcr8Q3UMB5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smcr8Q3UMB5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smcr8Q3UMB5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smcr8Q3UMB5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smcr8Q3UMB5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Smcr8Q3UMB5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smcr8Q3UMB5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Smcr8Q3UMB5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smcr8Q3UMB5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Gm22325-201ENSMUST00000158904 308 ntBASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smcr8Q3UMB5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smcr8Q3UMB5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smcr8Q3UMB5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smcr8Q3UMB5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms